Quantitative Genetics: Theoretical/Statistical
- Hadfield JD & Wilson AJ (2007) Multilevel selection 3: modeling the effects of interacting individuals as a function of group size Genetics 177 1 667-668
- Hadfield JD (2008) Estimating evolutionary parameters when viability selection is operating Proceedings of the Royal Society B 275 1635 723-734
- Hadfield JD (2010) MCMC Methods for Multi-Response Generalized Linear Mixed Models: The MCMCglmm R Package Journal of Statistical Software 33 2 1-22
- Hadfield JD, Wilson AJ, Garant D, Sheldon BC & Kruuk LEB (2010) The Misuse of BLUP in Ecology and Evolution American Naturalist 175 1 116-125
- Hadfield JD, Wilson AJ & Kruuk LEB (2011) Cryptic Evolution: Does Environmental Deterioration Have a Genetic Basis? Genetics 187 4 1099-1113
- Hadfield JD (2012) The Quantitative Genetic Theory of Parental Effects in The evolution of parental care OUP Eds. Royle NJ Smiseth PT & Kölliker M
- Firth JA, Hadfield JD, Santure AW, Slate J & Sheldon BC (2015) The influence of non-random extra-pair paternity on heritability estimates derived from wild pedigrees Evolution 69 5 1336-1344
- Nietlisbach P & Hadfield JD (2015) Heritability of heterozygosity offers a new way of understanding why dominant gene action contributes to additive genetic variance Evolution 69 7 1948-1952
- Hadfield JD (2016) The spatial scale of local adaptation in a stochastic environment Ecology Letters 19 7 780-788
- Thomson CE & Hadfield JD (2017) Measuring Selection when Parents and Offspring Interact Methods in Ecology & Evolution in press
- Hadfield JD & Thomson CE (2017) Interpreting Selection when Individuals Interact Methods in Ecology & Evolution in press
Quantitative Genetics: Empirical (Blue Tits)
- Hadfield JD, Nutall A, Osorio D & Owens IPF (2006) Testing the phenotypic gambit: phenotypic, genetic and environmental correlations of colour Journal of Evolutionary Biology 20 (2) 549-557
- Hadfield JD, Burgess MD, Phillimore AB, Clegg SM & Owens IPF (2006) Direct versus indirect sexual selection: genetic basis of colour, size and recruitment in a wild bird Proceedings of the Royal Society B 273 (1592) 1347-1353
- Hadfield JD & Owens IPF (2006) Strong environmental determination of a carotenoidâbased plumage trait is not mediated by carotenoid availability Journal of Evolutionary Biology 19 (4) 1104-1114
- Hadfield JD Heap EA, Bayer F, Mittell EA & Crouch N (2013) Disentangling Genetic and Prenatal Sources of Familial Resemblance across Ontogeny in a Wild Passerine Evolution 67 9 2701-2713
- Hadfield JD Heap EA, Bayer F, Mittell EA & Crouch N (2013) Intraclutch Differences in Egg Characteristics Mitigate the Consequences of Age-Related Hierarchies in a Wild Passerine Evolution 67 9 2668-2700
- Thomson CE, Bayer F, Crouch N, Farrell S, Heap EA, Mittell EA, Zurita-Cassinello M & Hadfield JD (2017) Selection on parental performance opposes selection for larger body mass in a wild population of blue tits Evolution 71 3 716-732
- Thomson CE & Hadfield JD (2017) Prenatal maternal effects appear to be insensitive to experimental or natural environmental variation Functional Ecology in press
Quantitative Genetics: Empirical (Other)
- Kruuk LEB & Hadfield JD (2007) How to separate genetic and environmental causes of similarity between relatives Journal of Evolutionary Biology 20 5 1890-1903
- Garant D, Hadfield JD, Kruuk LEB & Sheldon BC (2007) Stability of genetic variance and covariance for reproductive characters in the face of climate change in a wild bird population Molecular Ecology 17 1 179-188
- Phillimore AB, Hadfield JD, Jones OR & Smithers RJ (2010) Differences in spawning date between populations of common frog reveal local adaptation Proceedings of the National Academy of Sciences 107 18 8292-8297
- Morrissey MB & Hadfield JD (2011) Directional selection in temporally replicated studies is remarkably consistent Evolution 66 2 435-442
- Carpenter JA, Hadfield JD, Bangham J & Jiggins FM (2012) Specific interactions between host and parasite genotypes do not act as a constraint on the evolution of antiviral resistance in Drosophila Evolution 66 2 435-442
- Dworkin I, Tack D & Hadfield JD (2013) An experimental test for genetic constraints in Drosophila melanogaster arXiv.org
- Mittell EA, Nakagawa S & Hadfield JD (2015) Are Molecular Markers Useful Predictors of Adaptive Potential? Ecology Letters 18 8 772-778
- Phillimore AB, Leech DI, Pearce-Higgins JW & Hadfield JD (2016) Passerines may be sufficiently plastic to track temperature-mediated shifts in optimum lay date Global Change Biology 22 10 3259-3272
- Tansey CJ, Hadfield JD & Phillimore AB (2017) Estimating the ability of plants to plastically track temperature?mediated shifts in the spring phenological optimum Global Change Biology in press
Pedigree Reconstruction
- Hadfield JD, Richardson DS & Burke T (2006) Towards unbiased parentage assignment: combining genetic, behavioural and spatial data in a Bayesian framework Molecular Ecology 15 12 3715-3730
- Koch M, Hadfield JD, Sefc KM & Sturmbauer C (2008) Pedigree reconstruction in wild Cichlid fish populations Molecular Ecology 17 20 4500-4511
- Johnson PCD, Hadfield JD, Webster LMI, Adam A, Mable BK & Keller LF (2009) Bayesian paternity analysis and mating patterns in a parasitic nematode, Trichostrongylus tenuis Heredity 104 6 573-582
- Walling CA, Pemberton JM, Hadfield JD & Kruuk LEB (2010) Comparing parentage inference software: reanalysis of a red deer pedigree Molecular Ecology 19 9 1914-1928
- Waser PM & Hadfield JD (2011) How much can parentage analyses tell us about precapture dispersal? Molecular Ecology 20 6 1277-1288
Phylogenetic Comparative Analyses
- Hadfield JD & Nakagawa S (2010) General quantitative genetic methods for comparative biology: phylogenies, taxonomies and multi-trait models for continuous and categorical characters Journal of Evolutionary Biology 23 3 494-508
- Longdon B, Hadfield JD, Webster CL, Obbard DJ & Jiggins FM (2010) Host Phylogeny Determines Viral Persistence and Replication in Novel Hosts PLOS Pathogens 7 9 e1002260
- Henry LM, Peccoud J, Simon JC, Hadfield JD, Maiden MJC, Ferrari J & Godfray HCJ (2013) Horizontally Transmitted Symbionts and Host Colonization of Ecological Niches Current Biology 23 17 1713-1717
- Hadfield JD, Krasnov BR, Poulin R & Nakagawa S (2014) A Tale of Two Phylogenies: Comparative Analyses of Ecological Interactions American Naturalist 183 2 174-187
- Hodcroft E, Hadfield JD, Fearnhill E, Phillips A, Dunn D, O'Shea S, Deenan P, Leigh-Brown AJ (2014) The Contribution of Viral Genotype to Plasma Viral Set-Point in HIV Infection PLOS Pathogens 10 5 e1004112
- Hadfield JD (2015) Increasing the Efficiency of MCMC for Hierarchical Phylogenetic Models of Categorical Traits using Reduced Mixed Models Method in Ecology & Evolution 6 6 706-714.
- Longdon B, Hadfield JD, Day JP, Smith SCL, McGonigle JE, Cogni R, Cao C & Jiggins FM (2015) The Causes and Consequences of Changes in Virulence following Pathogen Host Shifts PLoS pathogens 11 3 e1004728